PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca24578.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 326aa    MW: 35543.6 Da    PI: 7.8792
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca24578.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.49.6e-16255303554
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                 +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+ ++ e++k
  Dca24578.1 255 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLR-RMREMEK 303
                 79*************************************999.5555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-15247298No hitNo description
SMARTSM003383.0E-14251320IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.484253297IPR004827Basic-leucine zipper domain
CDDcd147072.56E-24255304No hitNo description
SuperFamilySSF579596.88E-11255301No hitNo description
PfamPF001701.9E-12255297IPR004827Basic-leucine zipper domain
PROSITE patternPS000360258273IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MGTQTMGSQA GVGVGDTSVP KHSSLSRQGS LYSLTFDEVQ NQLGNLGKPL GSLNLDELLR  60
TVEATQTVGN GSSVDNGAEN LSQGGVYRQS SISLSRDLRE KTVEDLWREI QEGRKSSSSS  120
SSQEGNPERQ NTLGEMTLED FLVQAGVEID ALPGGNDKTN VGLGNLGSGV DSSVGNSLNV  180
AQHAQWMPYQ LLPQQQQQHS MMPMFMPGGT LSDNGFNDGQ LALATSPILG TMSDPHTVGR  240
KRIAPGSVVE KTVERRQKRM IKNRESAARS RARKQAYTHE LENKVSRLEE ENERLRRMRE  300
MEKALPSVPP PAQPKYQLRR TSSAPI
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010673247.11e-151PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_019103829.11e-151PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES35e-91AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0K9R5G71e-129A0A0K9R5G7_SPIOL; Uncharacterized protein
STRINGXP_010673247.11e-150(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-71ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]