PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_030930 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | Nin-like | ||||||||
Protein Properties | Length: 705aa MW: 80773.3 Da PI: 5.0444 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 39.4 | 1.2e-12 | 519 | 561 | 2 | 44 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 ek+ s e ls++ p+ d+Ak g++ ++ Kr+CR +GIkRW DCAR_030930 519 EKKFSYESLSQHLGRPLDDVAKRFGISRSTFKRKCRDLGIKRW 561 79999************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 13.81 | 504 | 589 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.3E-10 | 523 | 561 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 2.8E-17 | 613 | 701 | No hit | No description |
PROSITE profile | PS51745 | 17.697 | 617 | 698 | IPR000270 | PB1 domain |
SMART | SM00666 | 3.1E-18 | 617 | 698 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 1.9E-17 | 619 | 694 | No hit | No description |
Pfam | PF00564 | 1.8E-13 | 623 | 697 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 705 aa Download sequence Send to blast |
MIINFGHDEV TANDAATRNI LIQFWEASTE AIEGGRRYCE LTIPENSFEI LPYEVGGLSL 60 YRMHSISCTH RIQLDDEEDD YIIQSKQQEG VISRVFRYKR PEMTPHISFY SLHEYPHREF 120 ALSCGIQPSL CFPLFKTADC SGHPRGVVEL VSTCEQDLEN FKQYFESCFF VQDLNPALWQ 180 MDHVLTLVCQ KFPLRLAQFW VLTNPNSGAL SVMSQKSNLD SEELAPLCRF KDACLQTHLN 240 IGEGLVGKTC LFRKSFSCRN ITEFNITNYP LAHYARSCVS IACFTIFLRS FFPPFEECVL 300 EFFLPSQELS NYYPQTMSNT LLTTVKEHLP YYTFDLGEEL GEVPTLEVIN SSSTREIFKQ 360 THKNAVAVIN LDELEESPVK RIEPQSLTPK PNRSKEIIDE ANTMEINHFS LEITLEEAIR 420 NREYTVAARR VDELLEDVGH DKTTAAGSSS QTRISLPHQE VEVEKVTVDT SVQKLILSED 480 FSRIKNKGII VGAENVDRPI QFVSKTSLQD ELETEKQAEK KFSYESLSQH LGRPLDDVAK 540 RFGISRSTFK RKCRDLGIKR WQYGRRSTDD NISSKLRERL NAKEPSRRNF TCSGISSMQD 600 KCLNKVATAD KRQDPKKMIV EATYYDATIR FELPGFTIAE LEDDINERLH LERESFVMKY 660 QDDEGDWISI ACDEDLQECV EISKSSNNTT IKMSLDPRVN PQAQ* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017226060.1 | 0.0 | PREDICTED: protein NLP7-like | ||||
TrEMBL | A0A175YJM9 | 0.0 | A0A175YJM9_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12836 | 2 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 4e-42 | Nin-like family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_030930 |