PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_030912
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 677aa    MW: 75483.7 Da    PI: 4.4813
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_030912genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-181866255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +g+W+AeIr+      + +r +lg++ taeeAa a+++a+ +++g
  DCAR_030912 18 QYRGVRQRP-WGKWAAEIRET-----SgRRLWLGTYNTAEEAAVAYDRAAIRIRG 66
                 69*******.**********4.....35************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.92E-211875IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-291875IPR001471AP2/ERF domain
SMARTSM003801.6E-321880IPR001471AP2/ERF domain
PROSITE profilePS5103223.4461874IPR001471AP2/ERF domain
CDDcd000184.86E-311875No hitNo description
PfamPF008475.7E-131966IPR001471AP2/ERF domain
PRINTSPR003673.5E-101930IPR001471AP2/ERF domain
PRINTSPR003673.5E-104056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 677 aa     Download sequence    Send to blast
MNSSNARRGK SSVPQRGQYR GVRQRPWGKW AAEIRETSGR RLWLGTYNTA EEAAVAYDRA  60
AIRIRGDHAL LNFPDCSKIW RAKLVSPVGG STSGDKGVAE CGASCRDDMK LGLGKEIGER  120
NAEVMQDNIW EQFLQLDTPE SLCGTDENQG TENRDDLGSI ASGTRTDGDC SENEAMSSVY  180
DCMHRSGISF NHDLPSSFDV WQPDWERSDL MPDGVSDMFW NNWNWEVPFN FHIPTDEMQG  240
AKNRDDIDSI ISGTNTDGTC SENEAISGVY ENNSSMLILE NFSSADKWEK LKGDVRGDIA  300
VASRQYGSVS GVLPAHQAGS WNMGSLPQEQ AEKETMISEK QENTSQQLQL IAQSLFKDVT  360
DKNEQVLDTR KSTLNIDLHE EIAAGEMYRR TSNNIQDITH LHKNLDRTEE DLPIKCAEPR  420
PLTHEPKRSN EKGNTMEINF SASEVILKEV IRERTHTLAD QGVDELEQHM PSKSIEPRSL  480
TSQPINSVEF LEDERNAVRS ELPGRDGVMK IHHSALKGTS EEIVKEHAVA VERDEPIEES  540
AADDFEYAAS CEDVGHAMIT ASQPSSLQTM KSLPQQVNMK KVVLENEGDA SSQLPCILQP  600
CEDGNELEDQ VLEMQKSTPI INSHKGIATG ETSSYAPENI PEDIHCWSFY LYVLLDISYH  660
ACVPFMVKIS VWLVCS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-231874260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017225664.10.0PREDICTED: uncharacterized protein LOC108201848 isoform X2
TrEMBLA0A175YIM10.0A0A175YIM1_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-14ethylene-responsive element binding protein