PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_028432
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 451aa    MW: 49371.8 Da    PI: 6.2348
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_028432genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.7e-09232280553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  kr++r   NR +A rs +RK  +i+eLe+kv+++++e ++L+ +l  l+
  DCAR_028432 232 KRAKRIWANRQSAARSKERKMRYIAELERKVQAMQTEATTLAAQLTLLQ 280
                  9*****************************************9998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-10228300IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.553230280IPR004827Basic-leucine zipper domain
PfamPF001705.2E-8232279IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-9232280No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7232282No hitNo description
CDDcd147034.54E-22233281No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MDKDKSLNLG GGGGLPPPSG RFSPLPPSGN AIHVKTEALG STALPPLPPD SLSESGRFGH  60
GMSSDVNQFS YDISQMPDNP PKTVGHRRAH SEILTLPDDL SFDSDLGVVG GMDGPSYSDD  120
TEEDLFSMYL DMDKFNTSSA TSSFQVGEHS NASVQPSNNA PVSGSAAPAT ENIVSASTER  180
PRVRHQHSQS MDGSTTIKPE LLMSGTEDTS SVEAKKSMSA AKLAELALVD PKRAKRIWAN  240
RQSAARSKER KMRYIAELER KVQAMQTEAT TLAAQLTLLQ ALDTNGLTAE NSELKLRLQT  300
TEQQVHLQDA LNDALKEEIQ HLKLLTGQNI VNGSPMMNYP SSYGVNQQFY PNNQNMQSML  360
TAHQFQQLKL HSQKQQNQFQ QQQVHQFQQQ QLQLQQQQPS LLQQQQQPSL LQQHREQHAS  420
QGGDTKMKGS TSSTNLGESS PDINMHMSKD *
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017219998.10.0PREDICTED: probable transcription factor PosF21
RefseqXP_017219999.10.0PREDICTED: probable transcription factor PosF21
SwissprotQ040881e-147POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A175YKM30.0A0A175YKM3_DAUCS; Uncharacterized protein
STRINGEMJ235790.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-136bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]