PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_027724 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 30647.3 Da PI: 5.2071 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.2 | 3.6e-07 | 118 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GV +++ +g W+AeIrdp ++g + + +eA a+++a++ l+g DCAR_027724 118 KHRGVGQRP-SGTWAAEIRDPMTRG-----N---LRSDKEATIAYDHAANTLRG 162 79*******.7*********95543.....3...33459999999999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.71E-11 | 118 | 168 | No hit | No description |
PROSITE profile | PS51032 | 11.799 | 118 | 170 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.16E-7 | 118 | 169 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.5E-7 | 118 | 176 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.9E-10 | 119 | 168 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
MGLISPPLSS NTHTEHKTHT TIFTTLHPTT PPKIIRIHVA DPDATDSSGD ENDTSPLKIR 60 KYINEITIQP SSSIENNTAH VIEFMKTPLT DVENVCRKKR KVAGSSRMAK KMRKSGGKHR 120 GVGQRPSGTW AAEIRDPMTR GNLRSDKEAT IAYDHAANTL RGTHALANCS PEESNIEKPE 180 STQCLAKEAE EVESFSGFPG SDDVFLNEDP LYDPVMSVFD PLDFSMFDFE KEWCGSTMFG 240 GSMSEFGLWG GPTSWPTRDY FQELGDVFGS DPLLSMI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017223185.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor CRF2-like | ||||
TrEMBL | A0A175YMA4 | 0.0 | A0A175YMA4_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.2 | 2e-22 | cytokinin response factor 2 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_027724 |