PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_027724
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 278aa    MW: 30647.3 Da    PI: 5.2071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_027724genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.23.6e-07118162255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GV +++ +g W+AeIrdp ++g     +     + +eA  a+++a++ l+g
  DCAR_027724 118 KHRGVGQRP-SGTWAAEIRDPMTRG-----N---LRSDKEATIAYDHAANTLRG 162
                  79*******.7*********95543.....3...33459999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.71E-11118168No hitNo description
PROSITE profilePS5103211.799118170IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-7118169IPR016177DNA-binding domain
SMARTSM003804.5E-7118176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-10119168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MGLISPPLSS NTHTEHKTHT TIFTTLHPTT PPKIIRIHVA DPDATDSSGD ENDTSPLKIR  60
KYINEITIQP SSSIENNTAH VIEFMKTPLT DVENVCRKKR KVAGSSRMAK KMRKSGGKHR  120
GVGQRPSGTW AAEIRDPMTR GNLRSDKEAT IAYDHAANTL RGTHALANCS PEESNIEKPE  180
STQCLAKEAE EVESFSGFPG SDDVFLNEDP LYDPVMSVFD PLDFSMFDFE KEWCGSTMFG  240
GSMSEFGLWG GPTSWPTRDY FQELGDVFGS DPLLSMI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017223185.10.0PREDICTED: ethylene-responsive transcription factor CRF2-like
TrEMBLA0A175YMA40.0A0A175YMA4_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.22e-22cytokinin response factor 2