|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
DCAR_026825 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
Family |
BBR-BPC |
Protein Properties |
Length: 288aa MW: 32204.8 Da PI: 10.3992 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
DCAR_026825 | genome | ARS-USDA | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 293.8 | 6.8e-90 | 1 | 287 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerdmaflqrdkalae.rnkalverdnkllalllvenslasa 94
m+d g ++rn+ +ye++ + nl+l+l+ s + r + + re+ + + ++ + + + f ++ l+ k v rd+ + +++ ++
DCAR_026825 1 MNDGGLNSRNWNFYEQHYNRPGNLNLHLFPSFERRISGPflgRENAIVMNQNGGQLCP----F-VPESPLHVdPTKDAVARDKFVQQMISANS----- 88
99999999*********88889**********88888878766666644444444433....4.22333333124445555554444444333..... PP
GAGA_bind 95 lpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekk 192
+ +g++ + ++s+++lqq ql++++++ +e k + + ++++ + +kkrq+ + pk +kakk+k+ ++ +k++ ++++ +r+ka +k
DCAR_026825 89 SFAGYHEHPAAHSMHMLQQ----QLQQPPQQ-HEFPKDVRVAVDT-SVKKEDGAPVKKRQSLAAPKPPKAKKPKRCQTIQKENGTSSG--HRAKAARK 178
3567888899999998888....77777666.3333333344444.44455556677799***************7766666666665..79****** PP
GAGA_bind 193 sidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWA 290
++d+v+ng+++D s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekLa+e ++++ ++DL+ hWA
DCAR_026825 179 NMDVVINGINMDFSSIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASENFNFADAIDLRYHWA 276
************************************************************************************************** PP
GAGA_bind 291 kHGtnkfvtir 301
+HGtnkfvtir
DCAR_026825 277 RHGTNKFVTIR 287
**********8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MNDGGLNSRN WNFYEQHYNR PGNLNLHLFP SFERRISGPF LGRENAIVMN QNGGQLCPFV 60 PESPLHVDPT KDAVARDKFV QQMISANSSF AGYHEHPAAH SMHMLQQQLQ QPPQQHEFPK 120 DVRVAVDTSV KKEDGAPVKK RQSLAAPKPP KAKKPKRCQT IQKENGTSSG HRAKAARKNM 180 DVVINGINMD FSSIPIPVCS CTGTPQQCYR WGCGGWQSAC CTTTISMYPL PMSTKRRGAR 240 IAGRKMSQGA FKKVLEKLAS ENFNFADAID LRYHWARHGT NKFVTIR*
|