PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_026712
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 428aa    MW: 48092 Da    PI: 5.002
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_026712genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.41.8e-29161481128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                  lppG+rF P+deel+ ++Lk  +++ +    + i  v++y + P +L  ++  + e+ wyfF+kr +kya+g+r+ ra+ +gyWk+t    +++  ++
  DCAR_026712  16 LPPGYRFVPEDEELIEKFLKVIIKNPERGRVQGIFIVNLYASPPDELTaAHKPQCEDTWYFFTKRTRKYANGSRPARAAGRGYWKQTNVIDHIFGVDE 113
                  79**********************999777788**************93333345669***********************************98844 PP

          NAM  98 el....vglkktLvfykgrapkgektdWvmheyrl 128
                  e+    +g k tL ++ ++++   +tdW m+eyrl
  DCAR_026712 114 EKkpaeIGRKITLDYWCKKDKVDWRTDWKMNEYRL 148
                  444566**********99999999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-3514178IPR003441NAC domain
PROSITE profilePS5100538.64516178IPR003441NAC domain
PfamPF023656.9E-1717148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MEHPEDKFYD EIVSRLPPGY RFVPEDEELI EKFLKVIIKN PERGRVQGIF IVNLYASPPD  60
ELTAAHKPQC EDTWYFFTKR TRKYANGSRP ARAAGRGYWK QTNVIDHIFG VDEEKKPAEI  120
GRKITLDYWC KKDKVDWRTD WKMNEYRLYG PKSPDEQCSN AATSKEFDEW SLCRIYKSRG  180
SKQKNKGKQL VLQVEAESSS GTQPIAPQEH NEHFAGEADG NFTEQSAAAA SNNQLSIPRE  240
QYNGLFPGQF AGGNSTGQST AAASSNQLSI PREQYNGLYP GHFAGGNFTG QSTTAASNNQ  300
LSNPREQYNG LYPGGPGPSS VLQFNNSGAF PNHSNYMANV ASGSMNGMHY TSDDLLPENQ  360
YTYFMYENAA YVQPLRSLPP NCIPTWPPSD INQSSSSIPD QVTSEEEFDI YFNDLDFITY  420
DDLKKDL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-241618417171NO APICAL MERISTEM PROTEIN
1ut4_B8e-241618417171NO APICAL MERISTEM PROTEIN
1ut7_A8e-241618417171NO APICAL MERISTEM PROTEIN
1ut7_B8e-241618417171NO APICAL MERISTEM PROTEIN
4dul_A8e-241618417171NAC domain-containing protein 19
4dul_B8e-241618417171NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017221795.10.0PREDICTED: NAC transcription factor ONAC010-like
TrEMBLA0A175YQ720.0A0A175YQ72_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.26e-30NAC domain containing protein 47