PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_026609
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 254aa    MW: 27585.9 Da    PI: 4.8467
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_026609genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.41.3e-123863126
      G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                 kprlrWt eLHerFv+av+qLGG++ 
  DCAR_026609 38 KPRLRWTGELHERFVDAVTQLGGPDT 63
                 79*********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-113563IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-73863IPR006447Myb domain, plants
PfamPF143795.0E-2691138IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010628Biological Processpositive regulation of gene expression
GO:0016036Biological Processcellular response to phosphate starvation
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MYSSVHSLPL DGHAEFHSSV DGSGPGSDPC LVLTSDPKPR LRWTGELHER FVDAVTQLGG  60
PDTSCIAESQ DTGSSTSASS RMMAQDINDG FQVTEALRVQ MEVQRRLHDQ LEVQRRLQLR  120
IESQGRYLQS ILEKACKAID DQTVASVGLE TAREELSELA IKVANDYQQV MTVPLLSEIA  180
SSLETRNPIA ASGRIGDCSL DGSLASNGNP LSPISMSSQA AAMKKRSRAY SNLSPLDSNL  240
RQVEWMMSNF SQV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00378DAPTransfer from AT3G24120Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017220776.11e-178PREDICTED: myb family transcription factor APL-like
SwissprotQ94A574e-85PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A175YQR80.0A0A175YQR8_DAUCS; Uncharacterized protein
STRINGXP_008224497.11e-108(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37912344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.18e-74G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]