PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_025821 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 199aa MW: 23134.4 Da PI: 11.0392 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.2 | 1.5e-12 | 93 | 141 | 2 | 50 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +e +++rr+++NRe+ArrsR RK++ +e+L++ vk ++ N+++ ++l DCAR_025821 93 PEERKQRRMISNRESARRSRMRKQKHLENLRNQVKRFKIGNRDMMNRLH 141 56789************************************99986665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-10 | 84 | 141 | No hit | No description |
SMART | SM00338 | 8.6E-11 | 92 | 156 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.45 | 94 | 143 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.4E-10 | 94 | 143 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.33E-10 | 96 | 142 | No hit | No description |
CDD | cd14702 | 2.77E-14 | 97 | 140 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 99 | 114 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MLSAIPASSE IFGSQFPAFF EGGFPPWDCQ ELPPFLHQPN EQVQLFTPIP AKEPVFSNSG 60 SVRAELNATQ KNINQCATNR KRKSPESSGS DDPEERKQRR MISNRESARR SRMRKQKHLE 120 NLRNQVKRFK IGNRDMMNRL HTMIIHSRIV RMENERLQVE SVMLQQKLWD MRQILHARQL 180 QQQLSSSAWP CNNAPFHQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 108 | 115 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017240582.1 | 3e-59 | PREDICTED: basic leucine zipper 43 | ||||
TrEMBL | A0A164UDF3 | 1e-144 | A0A164UDF3_DAUCS; Uncharacterized protein | ||||
STRING | EOX91751 | 8e-48 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 6e-21 | basic leucine-zipper 6 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_025821 |