PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_025809
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 292aa    MW: 32615.9 Da    PI: 4.7978
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_025809genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like69.64.8e-22141196254
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvk...gLtlehvkSHLQkYR 54 
                   r++WtpeLHe+F +ave+LGG  ++tPk+il+ mk++   g+t+e++kSHLQk R
  DCAR_025809 141 SRIQWTPELHEAFTRAVEELGGCFNTTPKAILKRMKMNgitGITREQLKSHLQKVR 196
                  69*********************************9761115789*********99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.4E-11139197IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-19139197IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-17141197IPR006447Myb domain, plants
PfamPF002492.0E-8144195IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MYPEMPSTTS NLFTNSANQQ NQITHQPIQN IYVNTHAPPP GFAPIQAGFG QNYYDNFEGQ  60
PAYSTYTNPA YQAQGSQIPN PAGFSFHVGQ MTVNAPFYGQ GTPAYQYQVQ QMRTHLLQRN  120
HAVQDIPVAQ PDRPILPETQ SRIQWTPELH EAFTRAVEEL GGCFNTTPKA ILKRMKMNGI  180
TGITREQLKS HLQKVRNTAP QNSGIPDNEA RMTNVTFDSG EFALVVGNTA LQNKSDPQIS  240
DNEAHNHTIM TNVALDSGEF PHVDEYPTNN QSFDSDFDDF DEILQRFCDD C*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017217408.11e-177PREDICTED: transcription repressor KAN1-like
TrEMBLA0A164UD580.0A0A164UD58_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.12e-13phosphate starvation response 1