PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_025805 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | G2-like | ||||||||
Protein Properties | Length: 187aa MW: 20856 Da PI: 6.7188 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 33.3 | 1.1e-10 | 155 | 183 | 2 | 30 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPk 30 r++WtpeLHe+F +ave+LGG A Pk DCAR_025805 155 SRIQWTPELHEAFTRAVEELGGCFSAYPK 183 69**************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 9.4E-8 | 153 | 183 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MYPGMPSTTS NLFTNSANQP NQITHQPIQN IYVNTHAPPP GFAPIQAGFG QNYYNNFEGQ 60 PAYSTYINPA YQAQGSQIPN PAGFSFHVGQ MTVDAPFYGQ GTPAYQYQVQ QMRTHDNFVS 120 HQQAPPHGQV QRNHVVQDIP VAQPEYRPII PETQSRIQWT PELHEAFTRA VEELGGCFSA 180 YPKYRG* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017217408.1 | 1e-129 | PREDICTED: transcription repressor KAN1-like | ||||
TrEMBL | A0A161ZQI9 | 1e-132 | A0A161ZQI9_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.3 | 5e-07 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_025805 |