PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_025704 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | G2-like | ||||||||
Protein Properties | Length: 299aa MW: 33295.5 Da PI: 7.8237 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79.2 | 4.9e-25 | 223 | 278 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 kprlrWt++LH++F++av++LGG+++AtPk+i + ++ Lt ++vkSHLQk R + DCAR_025704 223 KPRLRWTHDLHREFMRAVDELGGPNVATPKKIIAKIPMHNLTTDEVKSHLQKCRQH 278 79**************************************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.031 | 220 | 280 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.7E-22 | 221 | 281 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 7.53E-13 | 221 | 281 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-20 | 223 | 278 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.4E-6 | 225 | 275 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MDIDLNSSLL YLNVSDLMAH IAVIDNTSEK VEKLNDYVKE LNAEMIRIKE SNCHSPLCIL 60 ILTEAIQKLE KEIQHYYKDM KDNREIEGRV TLENGNPKGA EMPGKSSDAN KGNSMSSIQL 120 GGKSIAYDTT KQTDAVHDNS SGSMREIAGS YENPRTQNNV NINQSGSAVI HYQGESRVII 180 RETSNFNNVQ HSSIAMVGLN FSGNYVTHVN HHPPASMMDP QKKPRLRWTH DLHREFMRAV 240 DELGGPNVAT PKKIIAKIPM HNLTTDEVKS HLQKCRQHAR KSNLAAQTTS AALPHNPH* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017217392.1 | 0.0 | PREDICTED: putative two-component response regulator ARR13 | ||||
TrEMBL | A0A161Y873 | 0.0 | A0A161Y873_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 3e-20 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_025704 |