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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | DCAR_024945 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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| Family | GRAS | ||||||||
| Protein Properties | Length: 274aa MW: 29801.2 Da PI: 4.9138 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 21.2 | 3.1e-07 | 189 | 230 | 1 | 42 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRla 42
l++lL +cA a ssgd +a+++L+ ++ ++sp+gd+ qRl
DCAR_024945 189 LKRLLHQCALAASSGDDLAAKEILNSIRLQSSPHGDASQRLG 230
5789************************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 274 aa Download sequence Send to blast |
MAEQPDLFHH VFDYIKDMLM EDEEDVGMFR EEDIKAKEQS FKEVLVREDP DFTGTSQARQ 60 VNTSAAAVLE TLVESSPTQN PGNILAPPTV LVASSNVEVD YSLKDSKGKK HCHEEASTAE 120 YLEETQSKKQ VTRYSEEASN LSEILDKVTL CPPEEDIASH TEESRLQESV AGGSSGKKVQ 180 DQRKHVVGLK RLLHQCALAA SSGDDLAAKE ILNSIRLQSS PHGDASQRLG SSEAGDRRHD 240 CGMPVGTRAG RLILGVPSLV GVPGRPPSWV RPS* |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
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| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_017217952.1 | 1e-147 | PREDICTED: scarecrow-like protein 14 | ||||
| TrEMBL | A0A164TQR0 | 0.0 | A0A164TQR0_DAUCS; Uncharacterized protein | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G59450.1 | 1e-10 | GRAS family protein | ||||
| Link Out ? help Back to Top | |
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| Phytozome | DCAR_024945 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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