PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_023661
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 341aa    MW: 38542.1 Da    PI: 4.7822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_023661genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-19119167254
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                   y+GVr++k +g+W+AeIrdp++   rkr++lg+++tae A +a++  ++++e
  DCAR_023661 119 TYRGVRQRK-WGKWAAEIRDPCQ---RKRIWLGTYDTAEAASRAYELKKLEFE 167
                  59******9.**********954...5*******************9999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.954119179IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-17119166IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.4E-22119165IPR001471AP2/ERF domain
SMARTSM003803.4E-19119179IPR001471AP2/ERF domain
PfamPF008472.1E-12120168IPR001471AP2/ERF domain
PRINTSPR003672.1E-10120131IPR001471AP2/ERF domain
CDDcd000181.00E-22120159No hitNo description
PRINTSPR003672.1E-10142158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MPEFNREMQP YQESFDKKFR KQPDSTKESS RIMRKIRIIC NDPDMTDSSD DERSNNVKKS  60
EPYGPKRIVR EIRLPIDGSG KPLNSSATES SCQDNNSKNT KKKRVMAKAP SQPQRSYTTY  120
RGVRQRKWGK WAAEIRDPCQ RKRIWLGTYD TAEAASRAYE LKKLEFEALV VPPFSGNSSK  180
NLTALDQHLI QPARSEESWS IVTPTSSSSV LKSRSSAKEF VCVDKHTAVE EGETLTLAEI  240
GKSLDLGFEL GPEIGNGQDG EMKLSSETGE ELGMGMELDY LFLDDFAKPL DEFGSLEDLQ  300
IFGLDNTELS GLPDWDFNEL DGEELTWKNE SRIEERTLIV *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017215310.10.0PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A161WQB80.0A0A161WQB8_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-32ERF family protein