PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_022389
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 484aa    MW: 55937.4 Da    PI: 4.0823
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_022389genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.24.1e-16161453128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve..PwdLpk......kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                  +Gf F+P+ +e+   yLk+k+egkkl++++ + + ++y+ +  Pw+  k       +++++k  +y F++ +kk   g+r  r++  g+W   g++++
  DCAR_022389  16 KGFIFEPSAQEICEIYLKNKIEGKKLPCKHLLFDENMYEDHstPWEVFKsddprwLINNKTKkVMYVFTELKKK---GERVLRKAGCGTWT--GQNRK 108
                  7***************************888999999976434***9644677774444444266999988775...789***999****6..77777 PP

          NAM  92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  v+++  +++ +g  +  +f +++ ++    +W+mhey+l
  DCAR_022389 109 VVRNkqGDAIIGYDRLHTFRTKEVED--GGNWTMHEYTL 145
                  77754355557877777777555555..69*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.97514160IPR003441NAC domain
SuperFamilySSF1019412.22E-1615159IPR003441NAC domain
PfamPF023652.0E-1216145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MEKYGCEACI VEFAMKGFIF EPSAQEICEI YLKNKIEGKK LPCKHLLFDE NMYEDHSTPW  60
EVFKSDDPRW LINNKTKKVM YVFTELKKKG ERVLRKAGCG TWTGQNRKVV RNKQGDAIIG  120
YDRLHTFRTK EVEDGGNWTM HEYTLHPNDY NCAVCKITRE EEEVVDQQPS QECPTASSDD  180
NVAHEDLDQE DLEWGSFAET LENIILQQPE ESGEACDENI NNIGSDQFPP ASTDDNVALE  240
NLDQEDLEWE SFAETLENIV LQQPEESETP STDDDVALED MDQEDLDWES FAETLENTIL  300
QQPEESGEAC HENINNIGSE QLPIEIDDDD VGNENMINVI AQPKGIEDTP TDKYHTDHNL  360
PSDPLSEVFK DYEEPRGMQC HCQDNSNQVV LAEQAQQSER MALVIHLAEN FDYYYKEQQQ  420
QERMAFILHL AENFDYYYKE QQQQQLQGGQ KNLPGKRKKC DYDEEDFSPK KKQKQQPFLC  480
NLQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A164VEZ70.0A0A164VEZ7_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1948623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.18e-11NAC domain containing protein 50