PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021563
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 294aa    MW: 32975.7 Da    PI: 8.201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021563genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.31.2e-1594144155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr++  +g + AeIrdp +   + r +lg+fgt+eeAa+ ++  + +l+g
  DCAR_021563  94 KKYRGVRYRA-WGTFGAEIRDPMK---KERRWLGTFGTPEEAARVYDSVAISLRG 144
                  59*****999.**********843...5999*********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.12E-2794151No hitNo description
PfamPF008473.2E-895144IPR001471AP2/ERF domain
PROSITE profilePS5103220.03395152IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-1795152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.3E-2595152IPR001471AP2/ERF domain
SMARTSM003804.6E-2795158IPR001471AP2/ERF domain
PRINTSPR003675.6E-796107IPR001471AP2/ERF domain
PRINTSPR003675.6E-7118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MNLTRKLTSP LLGHKRRRCL RKIVRITVTD HDATDSSSDE EAELYNRRRV KKYLNVIRVE  60
AGVASPRKRE VSDNGNAGRQ TKLASRPVNE SSEKKYRGVR YRAWGTFGAE IRDPMKKERR  120
WLGTFGTPEE AARVYDSVAI SLRGTKATTN FGNPSWGVKQ QIVVQSDSSN EFAEGSHQNT  180
LTSPTSILRN ENRPAPEEVK DKRKGKDKVF DPMNICMPMD NPFRDDDGFG SMEPISFADA  240
PIFHGIFLEN DELSGADMGF SYDIMYGIGT TGSTSRVTDD YHFEDSDFSP ATD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-15951511471Ethylene-responsive transcription factor ERF096
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017256578.10.0PREDICTED: ethylene-responsive transcription factor CRF4-like
TrEMBLA0A161ZTC60.0A0A161ZTC6_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-37cytokinin response factor 4