PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_018984 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | G2-like | ||||||||
Protein Properties | Length: 366aa MW: 41492 Da PI: 4.7716 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 68.3 | 1.3e-21 | 176 | 228 | 3 | 55 |
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +rWt eL erF +av++LGG+ +A Pk+il+ mkv+gL +h+kSHLQk R+ DCAR_018984 176 YIRWTGELEERFSRAVQELGGPFRARPKAILKKMKVQGLEHDHIKSHLQKVRS 228 589***********************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.4E-20 | 173 | 230 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.51E-10 | 173 | 230 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.8E-18 | 175 | 229 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.8E-6 | 178 | 226 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MSYFPVSANW GHPSAHRHMY TRNDVNRRHL MNSVPNNPAM YHLQPPQPQP HPHFEEPSQP 60 QPLQDQFWIP FQPEPFPEYG VPFQPEPYQD QFGIPFQPEP SQVLGIPAQW VPLYYGAPPQ 120 WHPYQPLQPQ PHQAPQPQPL EHFEMPQQPQ IEMPRDPGED VLVLNPNVSL FTAKTYIRWT 180 GELEERFSRA VQELGGPFRA RPKAILKKMK VQGLEHDHIK SHLQKVRSKA RPKLVDQEPA 240 VVQSSSDNAQ LPPGEAASDT GLNDCIIFLN ATCANSNVDV QSFFEDIEYY GRLLGSSETP 300 SFMQFLGAAQ PDHPQHQEDG VAQLDPPQNQ EDGVTQHQEE GVAQPDHQED GIAEPDHPQH 360 QEDGE* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A162A3Q1 | 0.0 | A0A162A3Q1_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-14 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_018984 |