PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_018808

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

G2-like

Protein Properties

Length: 364aa MW: 40556.6 Da PI: 6.1482

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_018808	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.5	1.9e-10	307	332	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 kprlrWtpeLHerF++a ++LGG + DCAR_018808 307 KPRLRWTPELHERFIRAATKLGGLSN 332 79*********************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.7E-8	305	332	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence Send to blast
MYSGMRSTSA LYPSHPSQQK QGSDNESQPG FGEPNYEQFS GQLHSAMKST YSTPSSYPMH 60 QNQNHGSGIQ QGLITNNSSF YHSVRNPSYS APQRYLMQQS SMTNIGAYPS ASTPASYHVP 120 LNQNYGFGVQ QSSMTKNGPF NHSGIMYHPL KKSPTYPLYQ PAAAQTQEVS TYSLRQQDVS 180 AYSLRQQEVS AYSLRQPADA QVQEAPAYLV RQRAAAQVQE APLAYHVHQR AAAQVQEAPS 240 AYLLHQHAVA HVPETPTYLV EQRAAAQEQQ VQVMRNGEEE EEEEAEEEEE EEVLEIRLDT 300 PIFQRGKPRL RWTPELHERF IRAATKLGGL SNSKLVAESQ DRTIALGEED GDIGNSKNLI 360 VIR*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence Send to blast

MYSGMRSTSA LYPSHPSQQK QGSDNESQPG FGEPNYEQFS GQLHSAMKST YSTPSSYPMH  60
QNQNHGSGIQ QGLITNNSSF YHSVRNPSYS APQRYLMQQS SMTNIGAYPS ASTPASYHVP  120
LNQNYGFGVQ QSSMTKNGPF NHSGIMYHPL KKSPTYPLYQ PAAAQTQEVS TYSLRQQDVS  180
AYSLRQQEVS AYSLRQPADA QVQEAPAYLV RQRAAAQVQE APLAYHVHQR AAAQVQEAPS  240
AYLLHQHAVA HVPETPTYLV EQRAAAQEQQ VQVMRNGEEE EEEEAEEEEE EEVLEIRLDT  300
PIFQRGKPRL RWTPELHERF IRAATKLGGL SNSKLVAESQ DRTIALGEED GDIGNSKNLI  360
VIR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017253248.1	0.0	PREDICTED: putative uncharacterized protein DDB_G0271606
TrEMBL	A0A161XUU5	0.0	A0A161XUU5_DAUCS; Uncharacterized protein

Link Out ? help Back to Top
Phytozome	DCAR_018808