PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_017975
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 482aa    MW: 52654.6 Da    PI: 5.4542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_017975genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.21.1e-14210259355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  DCAR_017975 210 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 259
                  9***************988532...5************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.52E-25208269No hitNo description
SuperFamilySSF541719.15E-18208269IPR016177DNA-binding domain
SMARTSM003801.4E-33209273IPR001471AP2/ERF domain
PROSITE profilePS5103219.177209267IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-18209268IPR001471AP2/ERF domain
PfamPF008471.9E-9210259IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MDSSISSHEN YHHIDSDEYE YQNDNWLGFS LFQPFHADPQ SVEHDGESTD LSMLTLGSPK  60
LEDFLGGCAD ESGAQAVCAR SNKARKVEHN SSASPSCARP GSPEDSQKQL VVVKPQDQAP  120
AKKAIESFGQ RTSIYRGVTR ILFHDRIDGR VDMKLICGTT VAEEKAKAEK EDKVSSYEKE  180
LEEMKNMTRQ EFVASLRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF  240
STQEEAAEAY DIAAIKFRGV NAVTNFDMSR YDVNSIATSN LPVGGTTTKS KSKSSSNPSG  300
SLKSASRNQS TQLDHCDLSM SSSSITFGMP VKQDSSDYWP VIAYNQQSYN STGTEGLYNQ  360
STAFCMDFNN DAAYFSTGGG GSYINNLQQQ QSSVDGGSSS SISFSTPMDL NIINPQKQNS  420
ADGGASSSIS FAMPMDLNSN INDNTPYYGG SEGNFYDWNI PFSSARASNL SVYQSPIYGM  480
E*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251550.10.0PREDICTED: AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A164YMK30.0A0A164YMK3_DAUCS; Uncharacterized protein
STRINGXP_010265446.11e-101(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.15e-70AINTEGUMENTA-like 5