PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_017811 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 26871.3 Da PI: 8.1048 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 51 | 99 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++y+GVr+++ +g+Wv+eIr+p kr++lg+f+t+eeAaka+++a+ + DCAR_017811 51 KKYRGVRQRH-WGSWVSEIRHP-----ImkKRVWLGTFDTPEEAAKAYDHAATLM 99 59*******9.**********7.....447*********************9766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.22E-32 | 51 | 111 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 4.7E-32 | 52 | 109 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.2E-38 | 52 | 115 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.9E-13 | 52 | 99 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-21 | 52 | 110 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.878 | 52 | 109 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-10 | 53 | 64 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-10 | 75 | 91 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MPVPSALRNA NFVGQLVVEF VTDHLYNVSS PTHTLLTPVE LYDPGFMVPS KKYRGVRQRH 60 WGSWVSEIRH PIMKKRVWLG TFDTPEEAAK AYDHAATLMS GRTAKTNFPV AVPGQDSNEA 120 NDNSYGNGAI PTTPDRGYED SGSATKSNRA ETIIKEKLKK WSERRVAPSL ICLMLDTKNS 180 HIGVWQKRAG AICSHSDWIS KFDLHNNPDF TKCQNSSIKR ETGDEEDRIA LQMIEELLN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 4e-16 | 51 | 112 | 1 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017228200.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor WIN1-like | ||||
Refseq | XP_017251588.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 1e-51 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A164YIQ4 | 1e-180 | A0A164YIQ4_DAUCS; Uncharacterized protein | ||||
STRING | XP_004508497.1 | 6e-57 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 5e-54 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_017811 |