PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_017622
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 293aa    MW: 32756.6 Da    PI: 4.3176
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_017622genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.53e-08130171445
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  +k+ +r ++NR AA +sR+RKk +++ Le k+  +e+e ++L
  DCAR_017622 130 SKKRKRQERNRDAAVKSRERKKLYVKDLEMKSRYFEGECRRL 171
                  6999*******************************9998877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.3E-4124191IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-10125187No hitNo description
PROSITE profilePS502179.22129186IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.75E-10131187No hitNo description
PfamPF001706.0E-7131172IPR004827Basic-leucine zipper domain
CDDcd147044.47E-13132183No hitNo description
PROSITE patternPS000360134149IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MSDLITGDDE FNLDQLLNDP DFLNDVNLFD ELPGQISGPD PYPNEKFAEI EQLLMNDDFD  60
QSKGDELLFD VLLDSPVESE ASRGEVLDDS KTSSPETVVQ NGDKDANDGE EDDKNFNEES  120
GDGEKDDPVS KKRKRQERNR DAAVKSRERK KLYVKDLEMK SRYFEGECRR LGMLLNCVIA  180
ENQALRLSLH SSKAFDASMT KQESAVLLLE SLLLGSLLWF LGNMCLLILP DSLQSTKEEV  240
PLENVDNGNQ GSLALVKAGR VEHGLHQNML GKRCKASRSR MRPSYLVPEV IA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131150KRKRQERNRDAAVKSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017253936.10.0PREDICTED: bZIP transcription factor 60-like
TrEMBLA0A161YLG50.0A0A161YLG5_DAUCS; Uncharacterized protein
STRINGXP_009608063.17e-58(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA71012128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.11e-17basic region/leucine zipper motif 60