PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_017584 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | STAT | ||||||||
Protein Properties | Length: 731aa MW: 81420.4 Da PI: 5.6618 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 194 | 1.6e-60 | 230 | 351 | 1 | 122 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 ldv+ll+a+gqpv+kdvevvasLlyad+ ++vek+ daeapLL+sydG+ef+s drp+kl++GrasfklkisqLsskcdn+Lf++ feip+l kypf+ DCAR_017584 230 LDVILLDAIGQPVNKDVEVVASLLYADNEAPVEKPIDAEAPLLTSYDGIEFASWDRPSKLINGRASFKLKISQLSSKCDNKLFCLGFEIPDLGKYPFF 327 8************************************************************************************************* PP STAT 99 eavskpirCisrsrntrsssltkk 122 +a+s+pirCisr r r+s +t+k DCAR_017584 328 RAISHPIRCISRHRYPRASPSTWK 351 ***************999988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF49899 | 2.69E-7 | 10 | 146 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
Gene3D | G3DSA:2.60.120.200 | 1.2E-6 | 19 | 150 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
SuperFamily | SSF55550 | 1.14E-8 | 618 | 685 | IPR000980 | SH2 domain |
Gene3D | G3DSA:3.30.505.10 | 2.4E-6 | 620 | 682 | IPR000980 | SH2 domain |
PROSITE profile | PS50001 | 9.885 | 621 | 730 | IPR000980 | SH2 domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 731 aa Download sequence Send to blast |
MGSSETMKEN DYLMLKDLKL EIQENNDSAT RGFAVCFWLY LQTCTSFPSI LLHHQVNTDG 60 TCSVPFLGLN EKKKLMLFPL SFLHQEAPSP GDQSWIENTC ASSKTEFPLK KWVHVGCEVS 120 VDFVRLYTNG ALVGVKPLSS ALNRDSHLNG PGLVSLSSTH GEAAGSYEIQ GYVHGVEILS 180 PTSPLKNYYL KDPPLQLSID ESSASDIDEE FDGVWGIVGG KASCRRNFSL DVILLDAIGQ 240 PVNKDVEVVA SLLYADNEAP VEKPIDAEAP LLTSYDGIEF ASWDRPSKLI NGRASFKLKI 300 SQLSSKCDNK LFCLGFEIPD LGKYPFFRAI SHPIRCISRH RYPRASPSTW KHQTSSMHLL 360 NSSQSFGMGE ESSDIPQNTV SAEKQSPSSK RIKLAQEKPL ALGRVGILLE QVNREGNPPA 420 LICNKDNVTS LQKLQETYVE AEKCSSGSES SEAGISKSCS ISSSEAPFSD SAIFRYCLEG 480 LSERSLMLKE IAKVASEQEL VNFAEQVSLY SGCFHHRHQI GMSKGLIENG NKAWNSVSEK 540 NKQVLWDNLS SEIEEEFKKI SCCSTRYLSV EDLELLRKIA GCQEVVKREN FERLWSWLYP 600 VAFTLSQEWV KVVWDSVLPK WIEGFITKEE AEASLQGPNG LQDPGTFVLR FPTSRSWPHP 660 DAGNLVVTYV GSDYNIHHKL LSLDLINSSG AKERNVKPLK EMLLEEPELS RLGRQETLTI 720 NLKSLFFKFD * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017253328.1 | 0.0 | PREDICTED: uncharacterized protein LOC108223526 | ||||
TrEMBL | A0A164YD85 | 0.0 | A0A164YD85_DAUCS; Uncharacterized protein | ||||
STRING | XP_008226365.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9394 | 23 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78540.1 | 0.0 | SH2 domain protein B |
Link Out ? help Back to Top | |
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Phytozome | DCAR_017584 |