PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_017405
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 232aa    MW: 25708.8 Da    PI: 4.7657
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_017405genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-173281255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++kGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa  +l+g
  DCAR_017405 32 KFKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALICLKG 81
                 89****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-293290IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-193290IPR016177DNA-binding domain
SMARTSM003801.7E-343295IPR001471AP2/ERF domain
CDDcd000181.15E-173289No hitNo description
PROSITE profilePS5103221.2063289IPR001471AP2/ERF domain
PfamPF008478.8E-113281IPR001471AP2/ERF domain
PRINTSPR003671.8E-83344IPR001471AP2/ERF domain
PRINTSPR003671.8E-85571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MVMKPQVSVE SNATASKDIA INTSSVNKKM NKFKGVRMRS WGSWVSEIRA PNQKTRIWLG  60
SYSTAEAAAR AYDAALICLK GPTANLNFPT FSQQNFPLNP HQVTAMSPKT IQKLAAQAAN  120
ASLDNATTSS PEDLPSPPPP STTSSSSSPS NTIEEDDLSF ISKFEDYCKP DQTALDTMDR  180
TAPWFNSFGS FKFRDMIDDM LIFDHPQPST MNVIEDHFYE EGEDIRLWDF C*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251257.11e-172PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLA0A162A2I11e-171A0A162A2I1_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.11e-31ERF family protein