PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_015640 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | G2-like | ||||||||
Protein Properties | Length: 191aa MW: 21478.2 Da PI: 9.4429 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 67.7 | 2e-21 | 76 | 130 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp L erF av +LGG kAtPk++l+ m+vkg+t+ + kSHLQk R DCAR_015640 76 KPRLKWTPVLNERFNLAVLELGGFFKATPKAVLQKMNVKGVTIIQTKSHLQKVRN 130 79**************************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.94E-11 | 74 | 134 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.0E-21 | 75 | 134 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-17 | 76 | 131 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MSEKNPPFTP IQTRFVENLY GNSHDQTVSR ENPARQEHVA THYLVNEEGQ VAQLERNIEG 60 NIYVEEQKNP NFGMGKPRLK WTPVLNERFN LAVLELGGFF KATPKAVLQK MNVKGVTIIQ 120 TKSHLQKVRN QVRKALNTIQ IPNAQAYDVP NSGSSMGENQ PLHQSNEIRN CHRIAPTDEG 180 HAVNNMKSDV * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017246659.1 | 1e-140 | PREDICTED: putative two-component response regulator ARR20 | ||||
TrEMBL | A0A165A6P2 | 1e-139 | A0A165A6P2_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 4e-16 | phosphate starvation response 1 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_015640 |