|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
DCAR_014778 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
Family |
GRAS |
Protein Properties |
Length: 459aa MW: 52576.7 Da PI: 6.0496 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
DCAR_014778 | genome | ARS-USDA | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 306 | 8.8e-94 | 78 | 455 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l++lLl A++v++++l + L++l +++ +gd++qR+aayf+ +L arl+ s y+ + ++++ +ee+ a++ +++vsP+++f+h+ta
DCAR_014778 78 LIHLLLISATFVDENKLDSSVESLSELFQNVCLTGDSVQRVAAYFADGLVARLLTRKSPFYNMIMKEPSA----EEEFLAFTELYKVSPYYQFAHFTA 171
689****************************************************999999988777775....788889999*************** PP
GRAS 99 NqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrled 188
NqaI ea+e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ s eel+et+ rL fA+ + +++fef+ l + +
DCAR_014778 172 NQAIIEAFEKEedsnnRALHVIDFDVSYGFQWPSLIQSLSDKAtsSSRISLRITGCGR----SLEELQETETRLVCFAKGFrNITFEFQGL-LRG--S 262
*********9988887889*********************999645555*********....9****************9758*******7.443..4 PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
++ +++ +++E++aVnlv++l +l + + +++++Lk+v l+P +v++veqea++n sFl++f+e+l+y++a+fdsl+ lp +s+ r +E
DCAR_014778 263 SDFADIKRRNNETVAVNLVFHLNTLT----NFS-KISDTLKTVHFLNPAIVILVEQEASRNPRSFLAQFMESLHYFAAMFDSLDDCLPLDSDGRLGIE 355
45699******************998....222.35579*********************************************************** PP
GRAS 287 rellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks......dg....yrveee..sgslvlgWkdrpLvsvS 371
+ lgrei++ e+++ ++ e++++W+er+e GF+ ++ls+k ++qaklll++ ++ dg +rv e+ s +l lgW+dr L+++S
DCAR_014778 356 KNHLGREIKSFMNYEKDSsNCNKYERMKTWKERMEGHGFRGLKLSSKSVMQAKLLLKMRSQycpvqcDGenggFRVFERdeSTALSLGWQDRFLLTAS 453
**************9998467899********************************986521111111122247777663344555************ PP
GRAS 372 aW 373
aW
DCAR_014778 454 AW 455
** PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MEETDEQEEF LTLTLAIVAD SRFDKKRKRR KREESIEPVS SNEDCEGRIF SLLQLREQML 60 KLDRKRKGVA EDGKGLHLIH LLLISATFVD ENKLDSSVES LSELFQNVCL TGDSVQRVAA 120 YFADGLVARL LTRKSPFYNM IMKEPSAEEE FLAFTELYKV SPYYQFAHFT ANQAIIEAFE 180 KEEDSNNRAL HVIDFDVSYG FQWPSLIQSL SDKATSSSRI SLRITGCGRS LEELQETETR 240 LVCFAKGFRN ITFEFQGLLR GSSDFADIKR RNNETVAVNL VFHLNTLTNF SKISDTLKTV 300 HFLNPAIVIL VEQEASRNPR SFLAQFMESL HYFAAMFDSL DDCLPLDSDG RLGIEKNHLG 360 REIKSFMNYE KDSSNCNKYE RMKTWKERME GHGFRGLKLS SKSVMQAKLL LKMRSQYCPV 420 QCDGENGGFR VFERDESTAL SLGWQDRFLL TASAWHCV*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 24 | 29 | KKRKRR |
2 | 24 | 31 | KKRKRRKR |
3 | 25 | 30 | KRKRRK |
4 | 25 | 31 | KRKRRKR |