PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_014630 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24507.2 Da PI: 6.8588 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 9e-17 | 139 | 189 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrdp + k r++lg++ t eAa+a++ a+ +++g DCAR_014630 139 HYRGVRMRP-WGKFAAEIRDP---KrKGSRIWLGTYETSVEAARAYDCAAFRFRG 189 8********.**********8...4334************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 2.9E-31 | 138 | 198 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.41E-32 | 138 | 197 | No hit | No description |
Pfam | PF00847 | 5.5E-12 | 139 | 189 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.933 | 139 | 197 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.35E-22 | 139 | 198 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 6.2E-37 | 139 | 203 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.3E-13 | 140 | 151 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.3E-13 | 179 | 199 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MKMMTNEEFW TLELISQHLL GEEFITSSDT IFLPDHLHSS VSESSNSTET FFESGYSEIE 60 STNSIHSLIN ISSPRHESHE NHSDSTFIST SSTEDDSDNY LLDFPITEPD FTASPKMKYK 120 RAKNKTAVCS RKSSETKKHY RGVRMRPWGK FAAEIRDPKR KGSRIWLGTY ETSVEAARAY 180 DCAAFRFRGS KAVLNFPSEA GKVEHAPHKY CMNVN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-29 | 138 | 197 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017248020.1 | 1e-160 | PREDICTED: ethylene-responsive transcription factor 5-like | ||||
TrEMBL | A0A165XBI9 | 1e-159 | A0A165XBI9_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 5e-37 | ethylene responsive element binding factor 5 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_014630 |