PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014340
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 563aa    MW: 62534 Da    PI: 5.0123
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014340genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.63e-5041311129
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                  lppGfrFhPtd el+++yLk+kv gkk+ + e+++e+++yk+ePwdL  k++ +++ ewyfFs+r++ky +g r+nrat++gyWkatgkd+ ++  ++
  DCAR_014340   4 LPPGFRFHPTDVELIMYYLKRKVMGKKFLF-EAMAELNVYKYEPWDLAvKSLLKRDLEWYFFSPRERKYGSGARTNRATETGYWKATGKDRGIIY-NN 99 
                  79*************************888.89**************9556666788**************************************.99 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrle 129
                  ++vg+ ktL+fykg+apkge+tdWvmheyrle
  DCAR_014340 100 RTVGMIKTLIFYKGHAPKGERTDWVMHEYRLE 131
                  9*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-594153IPR003441NAC domain
PROSITE profilePS5100556.9744153IPR003441NAC domain
PfamPF023651.3E-265130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MGILPPGFRF HPTDVELIMY YLKRKVMGKK FLFEAMAELN VYKYEPWDLA VKSLLKRDLE  60
WYFFSPRERK YGSGARTNRA TETGYWKATG KDRGIIYNNR TVGMIKTLIF YKGHAPKGER  120
TDWVMHEYRL EDKNLADTEI IQDSFVICKI FQKSGLGPKN GAQYGAPFSE EEWNEVESAE  180
EDGPFLTEHL KPSNHNALVA VNLAGTTASC STTMSKVVQC PTPLAINDPC SPSEGVVSWL  240
PICTNGAMHP VENYSTEKTN MFKSSQGAQD PITSAAFSEG LNNTQDICAI HSPVNGQVLS  300
GHSPYSDLDN LAPLNLIIPG TTSSCPISEP GLPRLSATSN IDTNMPYDLP EDELTALLSM  360
FTEDSRMIPF ENNEDYHTVI DHSVKAQTGV DKNLIYNGLG DLNNLGELRN SDFDFSNTHN  420
ANYTLHTMLP DDDMIFLELK DLDSPLKHSV EARESLRGPS DSSYSPYTCY QNLDGSPGGS  480
TLPKHVQNVS RLNLTSFPPE GSFWMEDLVE VSSKGPDIQN SEINGSDTLT GKKNPFQISC  540
RQPVGSSVAS QMQRRGSFHH FQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-47415315168Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00583DAPTransfer from AT5G64060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245675.10.0PREDICTED: uncharacterized protein LOC108217351
TrEMBLA0A165XMC00.0A0A165XMC0_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60502334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.12e-73NAC domain containing protein 103