PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_009401 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26177.2 Da PI: 4.7683 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 62 | 112 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r++ +g+Wv+e+r+p++n r++lg++ tae+Aa+a + a+ +l+g DCAR_009401 62 PVYRGIRRRD-SGKWVCEVREPTNN---SRIWLGTYPTAEMAARANDVAAIALRG 112 68*****999.7******9999764...*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.3E-12 | 62 | 112 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.01E-20 | 63 | 122 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.049 | 63 | 120 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.8E-27 | 63 | 126 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.7E-30 | 63 | 122 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.59E-29 | 64 | 122 | No hit | No description |
PRINTS | PR00367 | 1.2E-8 | 64 | 75 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-8 | 86 | 102 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MDNFFSNLDQ ALPQYPDSSS SGGSSSANYT DSPAQNSYEV LLASSNPKKR SGRKKFKETR 60 HPVYRGIRRR DSGKWVCEVR EPTNNSRIWL GTYPTAEMAA RANDVAAIAL RGRNACLNFA 120 DSAWRLPVPA SLDVKDIQIA AAKAAEAFRP KKNDNAAGTS AEKASVFPEN EMMLMDDIFG 180 FHENDNERIY VDEEAIFGMP QLINSMAEGM MLPPPQYGGD DMEDDKELPL WSYSF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By high-salt stress, drought stress and abscisic acid (ABA) treatment. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017242922.1 | 1e-175 | PREDICTED: dehydration-responsive element-binding protein 1B-like | ||||
Swissprot | Q9FJ93 | 7e-68 | DRE1D_ARATH; Dehydration-responsive element-binding protein 1D | ||||
TrEMBL | A0A166A226 | 1e-174 | A0A166A226_DAUCS; Uncharacterized protein | ||||
STRING | Migut.F01151.1.p | 8e-83 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA263 | 24 | 183 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 2e-66 | C-repeat-binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_009401 |
Publications ? help Back to Top | |||
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