PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_008016
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 186aa    MW: 19958 Da    PI: 7.3423
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_008016genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-193786255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr ++ +g++ AeIrdp     +  +++lg+f+tae+Aa+a++aa+++l+g
  DCAR_008016 37 RYRGVRKRP-WGKYGAEIRDPE----TqIYIWLGTFDTAEQAARAYDAAARELRG 86
                 69*******.**********74....35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.38E-193794No hitNo description
SMARTSM003801.6E-3537100IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.5E-303795IPR001471AP2/ERF domain
PfamPF008478.0E-123786IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-203795IPR016177DNA-binding domain
PROSITE profilePS5103222.9453794IPR001471AP2/ERF domain
PRINTSPR003672.3E-103849IPR001471AP2/ERF domain
PRINTSPR003672.3E-106076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MASKENAAES SKAVAASLNG EESSKTLQPC GSGQNVRYRG VRKRPWGKYG AEIRDPETQI  60
YIWLGTFDTA EQAARAYDAA ARELRGDKAI TNFPTPEANQ KSTLESSGRE RFAAALNPYL  120
AAHNGGVGSS LGYGSGYGLP FTYPEFRANL IASWSDFVSS SSRVDVNPAR KGLDIDLNLP  180
PPSDY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2034941172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233706.11e-134PREDICTED: ethylene-responsive transcription factor 11-like
TrEMBLA0A161XJ021e-132A0A161XJ02_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-20erf domain protein 9