PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_007393
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family MYB_related
Protein Properties Length: 267aa    MW: 30017.1 Da    PI: 7.0251
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_007393genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.71.9e-112872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+eE +l+ +a +++ ++   +W ++a++++ g+t  ++k  + 
      DCAR_007393 28 RWTPEENKLFENALARYDKDtpdRWQKVAAMVP-GKTVADVKRQYK 72
                     9********************************.********9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-62374IPR009057Homeodomain-like
PROSITE profilePS5129310.8872477IPR017884SANT domain
SMARTSM007174.4E-122577IPR001005SANT/Myb domain
SuperFamilySSF466894.16E-132782IPR009057Homeodomain-like
CDDcd001671.32E-92874No hitNo description
PfamPF002499.1E-102873IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MRFGMEILSP FSYFPNSSWL LEESKSTRWT PEENKLFENA LARYDKDTPD RWQKVAAMVP  60
GKTVADVKRQ YKELEDDVSS IEAGLFPTPG YSQSPFTLEW GNSTNGFDGF KASFGGKRSC  120
GNRPSDQERK KGVPWTEEEH KQHSGGKDKR RASIHDITTV NLNENQTPSP DNKRISSMDQ  180
CNALSQHTNS SAMSRTPYQW NQSNNGAAAM AFSQTSGNMF MSPYGLNSHG IKVEDHNFQR  240
ANIHESYMGT QDMVFQMQSG LHNLHG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A5e-1629941176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017231639.10.0PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H71e-100DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A166EH320.0A0A166EH32_DAUCS; Uncharacterized protein
STRINGPOPTR_0009s04730.11e-114(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-64MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]