PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_007241
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 399aa    MW: 43862.8 Da    PI: 4.3418
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_007241genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-20111158152
          AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52 
                  s+++GVr++k +g+W+AeIrd +     + kr++lg++ taeeAa+a++  + +
  DCAR_007241 111 SKFRGVRQRK-WGKWAAEIRDpF-----QsKRVWLGTYNTAEEAARAYDLKKIE 158
                  79*******9.**********55.....45*******************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.63E-18111160IPR016177DNA-binding domain
PfamPF008473.2E-14111158IPR001471AP2/ERF domain
CDDcd000181.02E-25111159No hitNo description
Gene3DG3DSA:3.30.730.101.4E-23112159IPR001471AP2/ERF domain
PROSITE profilePS5103220.784112169IPR001471AP2/ERF domain
SMARTSM003805.1E-21112175IPR001471AP2/ERF domain
PRINTSPR003671.6E-10113124IPR001471AP2/ERF domain
PRINTSPR003671.6E-10135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MPEFHRLNHN SGKKSRNKPV SVEESKMMMR KVRIICHDPD MTDSSDDEGG NDVKNSRYGP  60
KRIVREVLIP MADCPQPVEE SSCQGSNNGE KVAKKKRVVT RAPPSQARAS SKFRGVRQRK  120
WGKWAAEIRD PFQSKRVWLG TYNTAEEAAR AYDLKKIEFD SMLAAASSGR TSGNSNSHAL  180
QQIKNQPAAS EESGSVISRA SPSSVLELES SSSVKKTVED IINNNTCPAT ETLSLAEIGK  240
GLDLGLELGS SQNEQGLDFG MEFIPQIEQG LDTEMAVIPQ ANGAGVDVGV ELDSQIAQGL  300
KLEAEIGQEL DFGLDLDAFF LDDFVQPLEF GDLDDIQILG LDDADPSELP DCDFDEFESD  360
ELAWLNEIMD VQPTKNEAPR MNEQSRMNDQ QSFNIACL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017236227.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
RefseqXP_017236228.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
RefseqXP_017236229.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A166ED550.0A0A166ED55_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-28ERF family protein