PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_007159

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

G2-like

Protein Properties

Length: 279aa MW: 30944.1 Da PI: 5.3859

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_007159	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.1	6.8e-12	21	48	1	28
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28 kprl+W+p+LH++Fv+av+qLGG++ t DCAR_007159 21 KPRLKWNPQLHQKFVHAVAQLGGADSNT 48 79*********************99765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.3E-10	19	49	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MALQNMQQDQ NMNLVLSSDA KPRLKWNPQL HQKFVHAVAQ LGGADSNTEI FDEADGHSWA 60 YIKYRLGKGQ QSQSSLDDDQ AGKYLHSVLK KAQDTLSGCN ASSAEVELAK TELSQLVSMV 120 DSGCPSSSLS MLTEIHGSIL RSSEKKPSRG TRSSLESSLT SSESSGRKEG HFQEHETEEI 180 TNINPNSPEL SLMEMHSHKN SIPAEQGNGR KRSECSLFEG DSVDQPLWKR PKAQRTDQLT 240 RFDFLETLDL NSHYSSNLEF SRKEIDLNSK DVEQSDGI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017235617.1	1e-130	PREDICTED: uncharacterized protein LOC108209299
TrEMBL	A0A166EB26	0.0	A0A166EB26_DAUCS; Uncharacterized protein
STRING	XP_008339891.1	4e-39	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6036	19	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.2	2e-13	G2-like family protein

Link Out ? help Back to Top
Phytozome	DCAR_007159