PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_006652
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 398aa    MW: 43490.2 Da    PI: 5.7333
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_006652genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1513.2e-16194248357
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                  + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  +++ + 
  DCAR_006652 194 DAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYN 248
                  679*****************************************99998888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.5E-13191247No hitNo description
SMARTSM003387.4E-20192256IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.599194248IPR004827Basic-leucine zipper domain
PfamPF001701.4E-14195245IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.39E-12196246No hitNo description
PROSITE patternPS000360199214IPR004827Basic-leucine zipper domain
PfamPF124988.5E-36263386IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MDRVFSVEDI SDQFWSPPAR EESSKLMMNR SDSEWAFQSF LQQASALESE PPSQPVAVAG  60
DVKNPVEIPA NVPVDSEDYQ AYLKSRLDLA CAAVALTRAS SLKPQDSAAL LENGSQASNT  120
SQLVSQAPPK GSGHDLSKEE DKDAPAVTPL LPALQKKSAI QVKSTTSGSS RDHSDDDDEL  180
EGETETTRNG DPSDAKRVRR MLSNRESARR SRRRKQAHMT ELETQVSQLR VENSSLLKRL  240
TDISQRYNDA AVDNRVLKAD IETMRAKVKM AEETVKRVTG LNPMFQAMSS EISTIGMPSY  300
SGSPSDTSAD TIQDVQKQHF YQPAPMSHLP AQDQRAQNGL LQVPPIDNSQ QHSASGPVEG  360
NKMERTSSMQ RVASLEHLQK RIRGGVSSSE AQASGKQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208215RRSRRRKQ
2210215SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankX585770.0X58577.1 P.crispum CPRF2 mRNA for DNA-binding protein; bZIP type.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017236829.10.0PREDICTED: light-inducible protein CPRF2
SwissprotQ990900.0CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A161X4C90.0A0A161X4C9_DAUCS; Uncharacterized protein
STRINGPGSC0003DMT4000500961e-155(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.27e-79bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]