PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_006174 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | NAC | ||||||||
Protein Properties | Length: 344aa MW: 38493 Da PI: 4.4116 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.1 | 1.2e-34 | 227 | 335 | 7 | 116 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 F+ t+eel+ +yL++k++g + + +vi+e+di+++ePwdLp k+v +++ew+fFs+r+kky++g +++r+t+sgyWkatg++++v+s + ++vg+k DCAR_006174 227 FELTEEELILYYLRRKLDGFQKCV-QVIAEIDINQHEPWDLPeKSVIWSDNEWFFFSTRRKKYPQGFQSRRTTESGYWKATGRERNVKS-GARVVGTK 322 7789****************9777.99***************66666699***************************************.999***** PP NAM 104 ktLvfykgrapkg 116 +tLvfykgr p+ DCAR_006174 323 RTLVFYKGRPPER 335 *********9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 34.666 | 221 | 343 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-37 | 223 | 336 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-14 | 227 | 330 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence Send to blast |
MANPIDSSQD DSFQIDPLIG PDSFFFTGTN QTLLPIQPSE QADQKPVVLN QIPSSELDPI 60 CDDVEALVLN PIPSSELGPI CDEVEALVLN PIPSSEADLI SGQEPLVLNP ISSSEPNPIC 120 GEVVQATEQP LKLYPIPKTL LRSTGLNNWT MTSETQNSGA SATNIDREKS SSKKTGTGKK 180 EKQTGWNFDF ENPPEETTWS LVDGTWKPSI GGDPVPEETV QQWAETFELT EEELILYYLR 240 RKLDGFQKCV QVIAEIDINQ HEPWDLPEKS VIWSDNEWFF FSTRRKKYPQ GFQSRRTTES 300 GYWKATGRER NVKSGARVVG TKRTLVFYKG RPPERGKNRM DNA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-25 | 227 | 334 | 23 | 129 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-25 | 227 | 334 | 23 | 129 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-25 | 227 | 334 | 23 | 129 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-25 | 227 | 334 | 23 | 129 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swm_B | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swm_C | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swm_D | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swp_A | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swp_B | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swp_C | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
3swp_D | 3e-25 | 227 | 334 | 26 | 132 | NAC domain-containing protein 19 |
4dul_A | 3e-25 | 227 | 334 | 23 | 129 | NAC domain-containing protein 19 |
4dul_B | 3e-25 | 227 | 334 | 23 | 129 | NAC domain-containing protein 19 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017232255.1 | 1e-143 | PREDICTED: uncharacterized protein LOC108206461 isoform X1 | ||||
TrEMBL | A0A161Y7B0 | 0.0 | A0A161Y7B0_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44290.1 | 3e-38 | NAC domain containing protein 60 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_006174 |