PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_005165
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family BES1
Protein Properties Length: 326aa    MW: 34761.7 Da    PI: 7.3814
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_005165genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822204.92.3e-6331442148
       DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                  ++ r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc eAGw+ve+DGttyrkg+k  e+++++g sasasp+ss+q    
  DCAR_005165   3 SGSRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKVVERMDVMGGSASASPCSSYQ---- 96 
                  789*******************************************************************************************.... PP

       DUF822 100 ssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvss 148
                      +sp++s ++sp+sssfpsp s+  + ++++   +sl+p+l++ls+ ss
  DCAR_005165  97 ----PSPCASFNPSPASSSFPSPISSIYTGSNNNadpNSLIPWLKNLSSGSS 144
                  ....*******************99766655555666*********998443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.8E-644140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTSGSRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCDEAG  60
WTVEEDGTTY RKGCKVVERM DVMGGSASAS PCSSYQPSPC ASFNPSPASS SFPSPISSIY  120
TGSNNNADPN SLIPWLKNLS SGSSPSSSNF PLHLYIPGGS ISAPVTPPLS SPTARTPRMK  180
DGWDDPNAVP AWAGQHYPFL PSSTPPSPGH QTPPDSGWLS GVQTPQDGAS SPTFSLVSPS  240
TFGFREGVSC GGSRMWTPGQ SGTCSPAVTA GFDRTADVPM CDAISSEFAF GSHTKGLVKP  300
WEGERIHEEC VSDDLELTLG NPSTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-22675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-22675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-22675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-22675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017236660.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-126BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A166CTV00.0A0A166CTV0_DAUCS; Uncharacterized protein
STRINGXP_009352718.11e-161(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-112BES1/BZR1 homolog 4