PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_005023
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 303aa    MW: 33763.6 Da    PI: 6.2756
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_005023genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-20100150155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr+++ +g+W+AeIrdp +   r r +lg+++taeeAa  +++a+ kl+g
  DCAR_005023 100 KKYRGVRQRP-WGKWAAEIRDPMK---RVRLWLGTYDTAEEAAMVYDHAAIKLRG 150
                  59********.**********854...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.64E-34100157No hitNo description
Gene3DG3DSA:3.30.730.101.0E-30101158IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-22101158IPR016177DNA-binding domain
SMARTSM003801.7E-40101164IPR001471AP2/ERF domain
PROSITE profilePS5103224.065101158IPR001471AP2/ERF domain
PfamPF008477.0E-13101150IPR001471AP2/ERF domain
PRINTSPR003679.3E-11102113IPR001471AP2/ERF domain
PRINTSPR003679.3E-11124140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MPTYTEHKTH TTLFTHRPHP TGTKTVRISV TDPDATDSSG DENDAVFRSR KIRKFVNEIK  60
IESCSTQTNV TEEPKLKNPR RKKVAGKTKP AARCVMSSGK KYRGVRQRPW GKWAAEIRDP  120
MKRVRLWLGT YDTAEEAAMV YDHAAIKLRG PNALTNFTTP EVKKSASVSE DNDESAESHS  180
DLRSPKSVLR YNNDDSAEST RFTRAESTRS DNVEVKKEVM VKEEEVVGIS GNDGFVFGSD  240
PVLEDPFNDI FGPAGLSMFG FEEEKSGLYF GSSIEFGLPS WPTVDYFQDF GDVFGSDPLV  300
SL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2197157162ATERF1
3gcc_A1e-2197157162ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017232487.10.0PREDICTED: ethylene-responsive transcription factor ERF069-like
TrEMBLA0A166CQ770.0A0A166CQ77_DAUCS; Uncharacterized protein
STRINGXP_009763317.15e-79(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.28e-56cytokinin response factor 2