PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_002079
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 424aa    MW: 48406.6 Da    PI: 6.1954
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_002079genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1454e-45631882128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                   pG+rF+P d+el+v+yL +kv++++l+  + i+e+++yk++P+d+   +    +kewyfF++rd+ky++g r+nra+ +gyWkatg dk+v++ kg 
  DCAR_002079  63 LPGYRFNPFDHELLVHYLWRKVRNQPLPH-NKIAEIELYKYNPEDITqVEQGLVDKEWYFFTPRDRKYKNGLRPNRAAGNGYWKATGADKDVTC-KGV 158
                  69*************************99.77**************8334444789**************************************.999 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                   vg +k Lvfy+g+apkg kt+W+mhe+r+
  DCAR_002079 159 IVGHRKALVFYNGKAPKGDKTNWIMHEFRV 188
                  ****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-5260218IPR003441NAC domain
PROSITE profilePS5100552.00562218IPR003441NAC domain
PfamPF023652.3E-2364188IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MEDCTDNKPQ LMVKYQSFKE EENTSNISTD LVVVGNDSSI ERKPNIRRQA AVRINEKNDI  60
ECLPGYRFNP FDHELLVHYL WRKVRNQPLP HNKIAEIELY KYNPEDITQV EQGLVDKEWY  120
FFTPRDRKYK NGLRPNRAAG NGYWKATGAD KDVTCKGVIV GHRKALVFYN GKAPKGDKTN  180
WIMHEFRVKE EQKEQQRIRT SDNDMRLDDW VLCRIYKKDD RTRRAPKQSH ADNSFDNSLD  240
ESSPSNQNAV AATRNDNYET GGDLCYDIGG NNPPLMGQNV VVQNPQLMGV NDLRSITDLR  300
SAIAMNNNAH FTNHYVDTSM HTPYLANPPA YSNPQPLRYI AQSSFPTYSL ENLPYLDSSF  360
ENWGNTGQYY SPVENSFLND SPNDPVLVQS NTGHVLQSIS RNNIIVSENN SDIITPSNDN  420
SPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-546421817168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257853.10.0PREDICTED: NAC transcription factor ONAC010-like
TrEMBLA0A162B3490.0A0A162B349_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-58NAC family protein