PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_001795
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 726aa    MW: 79771 Da    PI: 6.1179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_001795genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000625575941355
                  HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  R+ i +++ eLrel+P+ +      K s  + Le++++++  Lq
  DCAR_001795 557 RQLIQDRIKELRELVPNgS------KCSIDSLLERTIKHMLFLQ 594
                  77899************55......7777789999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.3E-345161IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088811.045544593IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00198549594No hitNo description
Gene3DG3DSA:4.10.280.106.8E-4557600IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 726 aa     Download sequence    Send to blast
MGSQLRQALK SLCFDTCWNY AVFWKFEHQA QMVLTWEDGY YENHEQPDAS KKLAGYSYDG  60
QSSRDSLGLA VAKMSLHVYS LGEGIVGKVA ITGKHMWIST DKHVLDSCSL LEYSDGLLPQ  120
FSSGIRTIAV VPVVPHGVVQ LGSLDIIAED LMLVNHIKDN FLDFQASLSG HCSNIDSSSC  180
LSSISSRTSV SRNYRHLMSN ADKIVKNDKG NMWCPVVASL ERPPQRSYTV PAAEVYSRKM  240
VSTVNNDEPE YTVSGVGESS SVLPIASMDR QTQVDGQLTS EKKSDGHTTG IRGVGVVSKS  300
EDNDTPSLSN NCNNKCNFYN TALATGNNGA SMSCLPSAFQ DTGTGNYCGS FGAHDFSQES  360
RASSVKTSEL KAKTNHMDTC KTCFQFTAGC ELFEALGPSF KKQYTDLEWE TDKTENGALV  420
QISEGRTSSG NLLMINNGTE HLLEAVVANV CQSVSDVKCV NPKLGTAESL LTIDKLLEPC  480
SSDNHTIGSA NYSYDRSSLV EDCLAFSEVY GDKSSKGISS ASPSACSEQL ERPQELTKMN  540
KKRARPGENC RPRPRDRQLI QDRIKELREL VPNGSKCSID SLLERTIKHM LFLQCTTKHA  600
DKLQKCAESK LIDKETGVHV SSNNELGSSW AMEVESHLRV FPIMIENMNL SGQMLIEMLC  660
ENCSRFFEIA EAIRSLGMTI LKGSTEACGG KIWICFVAEG LNNRNVHRMD ILWSLVQILQ  720
PKTDV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017230212.10.0PREDICTED: transcription factor bHLH155-like
TrEMBLA0A166GMU30.0A0A166GMU3_DAUCS; Uncharacterized protein
STRINGVIT_07s0005g03070.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1035722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.11e-89conserved peptide upstream open reading frame 7