PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_001701 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 191aa MW: 21635.7 Da PI: 10.5393 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.6 | 9.6e-12 | 97 | 142 | 3 | 48 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +++r r+++NRe+A rsR RK+a+++eL+e++k L+aeN +Lk++ DCAR_001701 97 SDRRHQRLIRNRESAARSRDRKEARTAELKEEMKRLKAENAELKQK 142 7899***************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.6E-11 | 94 | 142 | No hit | No description |
SMART | SM00338 | 1.8E-9 | 95 | 163 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.795 | 97 | 164 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.6E-9 | 98 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.75E-8 | 99 | 142 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 103 | 117 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MEKIWKDIPD LPSLENPNNH FHGVMNLQES LGRPLVYLTP LLPATNVFFP SSSSSHQSLV 60 SDITCSSQPQ LPLAMHCGGG ARRRTGCSRE NDYQSSSDRR HQRLIRNRES AARSRDRKEA 120 RTAELKEEMK RLKAENAELK QKQKARTAEL KEEMKRLKAE NAELKQKQKV MEEAKALKKP 180 SLNRSASAPF * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017224170.1 | 1e-106 | PREDICTED: bZIP transcription factor 27-like | ||||
TrEMBL | A0A166GK60 | 1e-137 | A0A166GK60_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 9e-13 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_001701 |