PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_001619 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | G2-like | ||||||||
Protein Properties | Length: 203aa MW: 22404.2 Da PI: 4.5417 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 48.4 | 2e-15 | 80 | 111 | 25 | 56 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56 + AtPk+i+el++v++Lt+++vkSHLQkYRl+ DCAR_001619 80 QLATPKQIRELIQVDDLTNDEVKSHLQKYRLH 111 569***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.4E-6 | 80 | 114 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.8E-13 | 80 | 111 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 2.8E-13 | 80 | 114 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MIFNSQQLSL KTRPIFNAPN TITDLLGDVC NISDQIDKLN DIIQRLQDEI IKIDAFKTEL 60 PLTVLFVNDA IVALKEEIMQ LATPKQIREL IQVDDLTNDE VKSHLQKYRL HTRKVPSGTT 120 PTPANGPAAS ALGRLWSCKD QYSESAKQSM SQSGSPQGPL QLTETTGGTS TVKTDSMDDD 180 EDDKSQSYCC KTWIQTSINS DV* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017248592.1 | 2e-74 | PREDICTED: probable transcription factor KAN3 | ||||
Swissprot | Q9FX84 | 2e-18 | HHO6_ARATH; Transcription factor HHO6 | ||||
TrEMBL | A0A162B1Z0 | 1e-146 | A0A162B1Z0_DAUCS; Uncharacterized protein | ||||
STRING | XP_010255132.1 | 3e-37 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 5e-17 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_001619 |
Publications ? help Back to Top | |||
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