PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_001517
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family HB-other
Protein Properties Length: 345aa    MW: 38944.6 Da    PI: 4.6769
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_001517genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.4e-09275322653
                  S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
     Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                  +++k ql++Le+++ +++ p+ +++  + + ++L+ ++V  WF  +R+
  DCAR_001517 275 RIKKVQLDTLERVYGRTKRPTNAMISNIVHVTNLPRKRVVKWFEDKRT 322
                  68899****************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.523267327IPR001356Homeobox domain
SuperFamilySSF466894.28E-9269331IPR009057Homeodomain-like
CDDcd000868.81E-7270321No hitNo description
SMARTSM003895.0E-5273331IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.609.3E-9275326IPR009057Homeodomain-like
PfamPF000463.6E-7275322IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MGCSAQFSSS VAMILTSSCK QQQFNSLPIS FISNRAHLSS SRCVLTFGRR RGKSFPSIAN  60
KKKPSLPQTN IGEDDDLDED AFEALFRQLE EDLKNDDPSA LDGDEDISEE DLALLERELE  120
EALGDEELQK AFSSSVDESE METRKEGINN DEEEDDYDDE EEKQVVLKNW QIRRLAYALK  180
NGRRKTSIKN LAAETCLDRA FVLELLRDPP PKLLLMSASL PDIPAPTIVE PKTKPEEDAS  240
SENAIESEEL DTKKPGSKVK VPVHAMQSSW SAQKRIKKVQ LDTLERVYGR TKRPTNAMIS  300
NIVHVTNLPR KRVVKWFEDK RTEDEVPDRR VPYQRSTPET VSSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017233476.10.0PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLA0A162ALH00.0A0A162ALH0_DAUCS; Uncharacterized protein
STRINGVIT_04s0008g05190.t011e-116(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94282327
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-70overexpressor of cationic peroxidase 3