PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g046773m
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family SAP
Protein Properties Length: 454aa    MW: 50865.1 Da    PI: 6.6234
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g046773mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP687.51.7e-209945314454
                SAP  14 egseggeggdassgesegpsssrqr..aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrr 103
                        +g  gg+ g + +g++egpsssrqr  a+nevwpePf+eala+qvai+asrs+Grlaaa alanvfqvcstwravsrsdllw+rltrriW r
  orange1.1g046773m   9 SGGVGGHYGARRGGDFEGPSSSRQRrrAVNEVWPEPFVEALAAQVAIEASRSVGRLAAAAALANVFQVCSTWRAVSRSDLLWHRLTRRIWGR 100
                        333333344445599**99887765559**************************************************************** PP

                SAP 104 tkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlG 195
                        t+ll++tWr+eyiyrhrta+nfrtrry++++l fdp+dvd+   +d l+Crcl+lsd yla+GfadGavrlfdl+trlhv+tf+pqh drlG
  orange1.1g046773m 101 TNLLHATWRDEYIYRHRTAQNFRTRRYTHFNLYFDPSDVDN---PDGLTCRCLTLSDLYLACGFADGAVRLFDLTTRLHVRTFRPQHSDRLG 189
                        *************************************9988...689********************************************* PP

                SAP 196 rfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGslt 287
                        +fsravsGi+i+ds+l+fatldGdihvavid ++  ++r+a++G v++dG+l+df+G++r+wvGlyaG +GrafhiWd ++ee vfvGG lt
  orange1.1g046773m 190 QFSRAVSGIIITDSQLIFATLDGDIHVAVIDDVA-NETRTAHFGSVMDDGVLIDFTGCSRYWVGLYAGLAGRAFHIWDRQAEE-VFVGGDLT 279
                        *******************************965.89*****************************************99987.9******* PP

                SAP 288 dPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrG.......vatvrrve 372
                        d ++vmGW mlte+te+vGrvrvt++e+avaCts+r+++fdlrnqg+vl+e+   rGl v+s+d+++eay+vv++r         a+vrrv+
  orange1.1g046773m 280 DHNTVMGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGLYVTSVDVNAEAYIVVENRElenqnrrLAIVRRVD 371
                        *************************************************************************97642222222799***** PP

                SAP 373 nleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervg.evnalvaddrhvavsssdgtihlldfga 454
                        ++eevcrf++r+  + +v+gC+n+gyal++  gv+rvWe+e  e y+ys+rer+g ev a+v ddrhva+s   ++ihl+dfga
  orange1.1g046773m 372 TFEEVCRFSLRAdRNVNVMGCMNQGYALMCVEGVIRVWEVEGGE-YMYSFRERIGeEVIAFVGDDRHVAASC-GTNIHLWDFGA 453
                        ***********988899************************966.**********899**********9876.689******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.503.5E-868132No hitNo description
SuperFamilySSF813832.45E-869118IPR001810F-box domain
SuperFamilySSF509781.1E-11142450IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.106.9E-10144217IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.106.9E-10277322IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.106.9E-10372451IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
DGNGNGNGSG GVGGHYGARR GGDFEGPSSS RQRRRAVNEV WPEPFVEALA AQVAIEASRS  60
VGRLAAAAAL ANVFQVCSTW RAVSRSDLLW HRLTRRIWGR TNLLHATWRD EYIYRHRTAQ  120
NFRTRRYTHF NLYFDPSDVD NPDGLTCRCL TLSDLYLACG FADGAVRLFD LTTRLHVRTF  180
RPQHSDRLGQ FSRAVSGIII TDSQLIFATL DGDIHVAVID DVANETRTAH FGSVMDDGVL  240
IDFTGCSRYW VGLYAGLAGR AFHIWDRQAE EVFVGGDLTD HNTVMGWRML TEFTEFVGRV  300
RVTSHESAVA CTSSRVITFD LRNQGMVLGE RGYGRGLYVT SVDVNAEAYI VVENRELENQ  360
NRRLAIVRRV DTFEEVCRFS LRADRNVNVM GCMNQGYALM CVEGVIRVWE VEGGEYMYSF  420
RERIGEEVIA FVGDDRHVAA SCGTNIHLWD FGA*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006469483.20.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-180SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLV4U4Z10.0V4U4Z1_9ROSI; Uncharacterized protein
STRINGXP_006447777.10.0(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-180SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]