PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g041972m | ||||||||
Common Name | CISIN_1g041972mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | G2-like | ||||||||
Protein Properties | Length: 153aa MW: 17159.6 Da PI: 9.165 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 23 | 1.8e-07 | 38 | 73 | 4 | 39 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39 +Wtp+ H++Fvea ++ GG ++ ++ e+mk + orange1.1g041972m 38 FVWTPNCHRKFVEAAKESGGFDNVSAFSVWEIMKAE 73 58*******************************854 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.3E-7 | 33 | 72 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MRGDRRINPF HLGNIKLYPR DRRTRRYSPY VRTSKRPFVW TPNCHRKFVE AAKESGGFDN 60 VSAFSVWEIM KAEVDGVSPT LNDASSVLGM LQFMFPEYAV SPPPTVTFYI DVKSEVGSCE 120 AMVSEFGKLK LGPKTESSSC DAMVSEFGKF NI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A067E947 | 1e-109 | A0A067E947_CITSI; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g041972m |