PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g038341m
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 352aa    MW: 39473.4 Da    PI: 6.051
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g038341mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.84.9e-13118175562
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                        kr rr ++NR++A++sR +K++++  Le+k+k+Le++  +L  +++ ++++ + l++e
  orange1.1g038341m 118 KRLRRIESNRVSAQKSRMKKLQYVTDLEKKAKALENQIAMLTPQVSLYQNMQEFLQKE 175
                        99**********************************************9999887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-10114178IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.806116179IPR004827Basic-leucine zipper domain
PfamPF001701.6E-10118175IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11118172No hitNo description
Gene3DG3DSA:1.20.5.1705.6E-13118173No hitNo description
CDDcd147033.18E-17119166No hitNo description
PROSITE patternPS000360121136IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MEGMKDSNEN NNNKKKPFSL MDSSSLPLVT GSIQVWKKPY SMNYGDNWAS SSGTKPSHPP  60
PPSDHLPMVN DFDNNKTSGN RNPSPPSEHK MVIPSSGDDT AAVNTRWTRN AEHSMDPKRL  120
RRIESNRVSA QKSRMKKLQY VTDLEKKAKA LENQIAMLTP QVSLYQNMQE FLQKEQRSLS  180
ERMTTYNNNI VFINAEIADN KAEVGRLRQL HLYQQQLKML EQNGLPVWDC GLDELMNSTW  240
CPTPGPGQMV YANPNQGDPY NGESIEEILR LHQHKMKQVP VLCVDDNHNA ETDMLMMPGW  300
GTAAGHMPNP SWILQSGPPE NADMMTDPNL GGIEQILSLN NNMDEPAAGF P*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015388810.10.0basic leucine zipper 34-like
TrEMBLA0A2H5ND510.0A0A2H5ND51_CITUN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144181821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.26e-15bZIP family protein