PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g037457m
Common NameCISIN_1g037457mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 75aa    MW: 8932.35 Da    PI: 6.7752
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g037457mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM23.51.6e-07649449
                NAM  4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                        frFhP  ee++ + L++k  + ++++ ++i +vd y+++P++L  
  orange1.1g037457m  6 SFRFHPAGEEII-NLLNEKGLDPDFSV-QTIYKVDKYYFDPRQLFC 49
                       69**********.99*********999.88**************63 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-7351IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MGYLLSFRFH PAGEEIINLL NEKGLDPDFS VQTIYKVDKY YFDPRQLFCK YHHLAITLQQ  60
FTEFMVFLRA WSCF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024045628.13e-25uncharacterized protein LOC112100394 isoform X3
TrEMBLA0A067FR746e-49A0A067FR74_CITSI; Uncharacterized protein