 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
orange1.1g021515m |
| Common Name | CISIN_1g018215mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
WRKY |
| Protein Properties |
Length: 312aa MW: 33436.8 Da PI: 10.0683 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g021515m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 32.7 | 1.5e-10 | 287 | 306 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS
WRKY 3 DgynWrKYGqKevkgsefpr 22
D y+WrKYGqK++kgs++pr
orange1.1g021515m 287 DDYSWRKYGQKPIKGSPHPR 306
99*****************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MAVELMMGYG CGDSFAAAVK MEENAVQEAA SEGMQSIGEF IKLLSRSGQV PSEQQTQYQE 60
STSSSPTNLE PDKEIKVAAE VAVNNFKKVI SLLGRPRTGH ARFRRAPVGS PPPPPPPPPQ 120
KEEKVHLQEP AGPSVQSTNH LSKEQVSAFK VYCPTPVHRL PPLPHQVHKS NPNSTVVTKS 180
DHVPSSINFS ASATNSFISS LTGTAGDTDS IQPSFSSGFQ FTTPSSAGKP PLSSSSLKRK 240
CNSMDDAALK CGSSSGRCHC SKKRKSRIKR VTRVPAISSK MADIPPDDYS WRKYGQKPIK 300
GSPHPRCASV N*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
