PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g015575m | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 405aa MW: 46472.4 Da PI: 6.9111 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.3 | 3.6e-24 | 12 | 131 | 8 | 128 |
NAM 8 hPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +P+d el+ + Lkkk + +++ ik++ +i+++ePwdL + ++++e++ +yfF k + y++++ ++rat++g Wk t k ++ + + orange1.1g015575m 12 QPSD-ELILCLLKKKRLDPHFSY-GPIKDIgHICSLEPWDLATesETDSEDQTCYFFYKPR--YTKSNDAHRATNAGSWKVTRKVSQIEA-R 98 5776.7999********999999.88****99*********84235566777889999875..5667799*******************9.8 PP NAM 97 gelvglkktLvfy.kgrapkgektdWvmheyrl 128 + l+g+kk+L+fy +g +k t+W mhey++ orange1.1g015575m 99 NGLTGTKKSLTFYlRGLPRKEAITEWGMHEYHV 131 889**********888899999*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 28.473 | 5 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-11 | 10 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.27E-27 | 14 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence Send to blast |
MESHMREWYK SQPSDELILC LLKKKRLDPH FSYGPIKDIG HICSLEPWDL ATESETDSED 60 QTCYFFYKPR YTKSNDAHRA TNAGSWKVTR KVSQIEARNG LTGTKKSLTF YLRGLPRKEA 120 ITEWGMHEYH VKDDPSYEKE FVLCRIFRRR NKKKRGISTT DEGESSEQLV SSPQQSPCDH 180 SISNGNHSEE STHTIPQQQL QYHNSISYPR NLNVQNTFAY PQSITDDSPT QLSPGNHLIS 240 NRNHNDENIP TNQPLLQIQN HNLISCVGNH SEGTTHTYPQ QLPNHNSISY TGNRIEQNMY 300 LLKYLPNYSP AQQLPCDHFI SARNYSEEYV PINQQPQPND NLISHLGSQI EGFSPTNSLL 360 PQNSNLEWQL PLHHPLEIHN SAENPFRKDV SQLEKSRHTV ATIG* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006465069.1 | 0.0 | NAC domain-containing protein 7-like isoform X1 | ||||
Refseq | XP_024039822.1 | 0.0 | NAC domain-containing protein 7-like isoform X1 | ||||
TrEMBL | A0A2H5QBT6 | 0.0 | A0A2H5QBT6_CITUN; Uncharacterized protein | ||||
STRING | XP_006465069.1 | 0.0 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM13336 | 4 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-19 | NAC 007 |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g015575m |