PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | fgenesh1_kg.2_#_60_#_3265_1_CBOZ_CBPA | ||||||||
Common Name | COCSUDRAFT_32175 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Coccomyxaceae; Coccomyxa; Coccomyxa subellipsoidea
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Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 22314.2 Da PI: 8.2416 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.6 | 1.1e-07 | 156 | 208 | 10 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 k+kNR A+rr+R+R k i L+e+ ++L+++ ++ k +e+++ke++ lk fgenesh1_kg.2_#_60_#_3265_1_CBOZ_CBPA 156 KEKNRAAQRRFRERQKGLISALKEREETLSKQCEEQKRLIETMQKEIQVLKEI 208 79**********************************************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0064 | 149 | 211 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.56E-7 | 156 | 208 | No hit | No description |
CDD | cd14686 | 4.16E-8 | 156 | 203 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 156 | 169 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-6 | 156 | 209 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MMQQQQQQRS NPGDWAPFLA ALAGADPQQI APILAAILPK PNGGAAAAGQ DAEGRAGIAG 60 LRAAAQAQGG EGSAEGAPAF TELAGRVFPG KPEGDAAASA SAPKEAMQID TASLLPLLQL 120 TQPHLSLGGD AGHQSAGDSG QAGLSQAGGG VAKCAKEKNR AAQRRFRERQ KGLISALKER 180 EETLSKQCEE QKRLIETMQK EIQVLKEIIH SKDPK* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_005651015.1 | 1e-150 | hypothetical protein COCSUDRAFT_32175 | ||||
TrEMBL | I0Z752 | 1e-148 | I0Z752_COCSC; Uncharacterized protein | ||||
STRING | XP_005651015.1 | 1e-149 | (Coccomyxa subellipsoidea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP7936 | 4 | 5 |
Link Out ? help Back to Top | |
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Entrez Gene | 17044481 |
Publications ? help Back to Top | |||
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