PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | estExt_fgenesh1_pm.C_170068 | ||||||||
Common Name | COCSUDRAFT_54523 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Coccomyxaceae; Coccomyxa; Coccomyxa subellipsoidea
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Family | bZIP | ||||||||
Protein Properties | Length: 78aa MW: 8816.99 Da PI: 9.1178 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.7 | 5.8e-14 | 7 | 52 | 1 | 46 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +++ k++ rk+kNR +A +sR+R++a+++ Lee+v++L++e + L estExt_fgenesh1_pm.C_170068 7 DRDAKKQLRKEKNRASAAASRARREAYTASLEEEVAKLKEEKSWLE 52 5899*************************************98776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.9E-13 | 5 | 56 | No hit | No description |
SMART | SM00338 | 5.7E-6 | 7 | 74 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-11 | 8 | 52 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.588 | 9 | 56 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-11 | 11 | 58 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 15 | 29 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence Send to blast |
MEDHMEDRDA KKQLRKEKNR ASAAASRARR EAYTASLEEE VAKLKEEKSW LEGQVNSPDH 60 AMPMSLPARA PMRHLSL* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_005644568.1 | 2e-48 | hypothetical protein COCSUDRAFT_54523 | ||||
TrEMBL | I0YNQ5 | 4e-47 | I0YNQ5_COCSC; Uncharacterized protein | ||||
STRING | XP_005644568.1 | 7e-48 | (Coccomyxa subellipsoidea) |
Link Out ? help Back to Top | |
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Entrez Gene | 17037998 |
Publications ? help Back to Top | |||
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