PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK27986.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family Trihelix
Protein Properties Length: 304aa    MW: 34138.8 Da    PI: 6.3945
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK27986.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.92e-1629120187
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                +W+++ + +Li+a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ ++k+yk +k++ ++ +   ss++ +fd+l+a
  PK27986.1  29 CWSEEATSTLIDAWGRRYLELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKVEKARVSSSNGALSSSWTFFDRLDA 120
                7****************************************99999****************************99989999*******985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.5E-2627121No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGDITESLTP SSATPVSSHS RPMPVREDCW SEEATSTLID AWGRRYLELN RGNLRQKDWQ  60
DVADAVNALH GHTKKTHRTD VQCKNRIDTI KKKYKVEKAR VSSSNGALSS SWTFFDRLDA  120
LIGSNQKKPS PSLSPSPPIA VPLHSSSSYR KNSSAATVAS SALVALRQKR PALSAAPEEG  180
FFRRNYSAMA AAAAAAEAEE DEDDLENEED VEEEEEVEKE RYSDDESVDG AGLRSLARAI  240
SRFGEVYEKV EAEKLRQMVE LEKKRMQFAK DLEVRRMRMF MDTQLQLERI KRGKRSGSND  300
IYGX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004293945.11e-133PREDICTED: trihelix transcription factor ASIL2-like isoform X1
RefseqXP_022925758.11e-134trihelix transcription factor ASIL1-like isoform X1
TrEMBLA0A2P5EP441e-137A0A2P5EP44_TREOI; Trihelix transcription factor (Fragment)
STRINGXP_004293944.11e-130(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.16e-43sequence-specific DNA binding transcription factors